Website of Marijn Stollenga
Evolution of Virulence : Demo
A python demo using opengl showing the dynamics of a model of selection in virulence. Model is according to the chapter "Evolution of Virulence" in the book "Dynamics of Evolution" of Martin A. Nowak.
You need git to checkout the project. Type in the following line:
git clone http://www.ai.rug.nl/~mstollen/demo/demo.git demo
Usage:
python visualisation.py [experiment-file]
there are three experiment files currently:
- one_v: interaction between one uninfected, and one infected population
- two_v: interaction between one uninfected, and two infected populations
- super_infection: interaction between one uninfected, and several infected populations including superinfection
These experiment files are human-readable and editable and are written in YAML (link). Once a file is edited you can press 'r' in the simulation to reload it. 'p' pauses the simulation.
superinfection at several moments in time:
